Is this possible to delete bad backlinks from webmaster tool.

I believe the only way you can delete the bad links is go to the website and ask them to delete your link or if there is an option for you to delete the link yourself then you can obviously do that.
 
Asking the owner or webmaster of that particular website to remove your link is the only way to delete the link. But as far as google webmaster tool is concerned, you can disavow unwanted links by uploading disavow links file in webmaster tools to neutralize their harmful effects in SEO but I'm not sure whether it fully works or not.
 
Hello! Google's Disavow Tool is a webmaster tool that allow website owners to request on google removal of unnatural and low-quality links that may harm your website's ranking.
 
Disavow backlinks

This is a two-step process. First, you’ll need to download a list of links to your site. Next, you’ll create a file containing only the links you want to disavow, and upload this to Google.

Download links to your site

On the Webmaster Tools home page, click the site you want.
On the Dashboard, click Search Traffic, and then click Links to Your Site.
Under Who links the most, click More.
Click Download more sample links. If you click Download latest links, you'll see dates as well.
 
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